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Externally dependent binding models¶
Some binding models have a variant that can use external sources as specified in /input/model/external/ (also see Section Dependence on external function for more information, and Section Binding model feature matrix on which binding models support this feature).
For the sake of brevity, only the standard variant of those binding models is specified below.
In order to obtain the format for the externally dependent variant, first replace the binding model name
Each parameter \(p\) (except for reference concentrations
XXX_REFQ) depends on a (possibly distinct) external source in a polynomial way:
Thus, a parameter
XXX_YYY of the standard binding model variant is replaced by the four parameters
Since each parameter can depend on a different external source, the dataset
EXTFUN (not listed in the standard variants below) should contain a vector of 0-based integer indices of the external source of each parameter.
The ordering of the parameters in
EXTFUN is given by the ordering in the standard variant.
However, if only one index is passed in
EXTFUN, this external source is used for all parameters.
Note that parameter sensitivities with respect to column radius, column length, particle core radius, and particle radius may be wrong when using externally dependent binding models. This is caused by not taking into account the derivative of the external profile with respect to column position.
For binding models that do not support multiple bound states, many parameters can vary per component and their length is taken as
However, these models still support non-binding components.
In this case, the entries in their parameters that correspond to non-binding components are simply ignored.
Multiple particle types¶
The group that contains the parameters of a binding model in unit operation with index
This is valid for models with a single particle type.
If a model has multiple particle types, it may have a different binding model in each type.
The parameters are then placed in the group
/input/model/unit_XXX/adsorption_YYY instead, where
YYY denotes the index of the particle type.
Note that, in any case,
/input/model/unit_XXX/adsorption_000 contains the parameters of the first (and possibly sole) particle type.
This group also takes precedence over a possibly existing
- Bi Steric Mass Action
- Extended Mobile Phase Modulator Langmuir
- Generalized Ion Exchange
- Mobile Phase Modulator Langmuir
- Multi Component Anti-Langmuir
- Multi Component Bi-Langmuir
- Multi Component Langmuir
- Multi Component Spreading
- Multi-State Steric Mass Action
- Self Association
- Simplified Multi-State Steric Mass Action
- Steric Mass Action